slitflow.img.montage module

class Gray(info_path=None)

Bases: Image

Create montage image from image stack.

This class is brief wrapper of skimage.util.montage().

Caution

The input image stack must be split so that all frames to be tiled into a montage image are included.

Parameters:

• reqs[0] (Image) – Image stack to create montage.

• param["grid_shape"] (tuple of int) – See skimage.util.montage().

• param["padding_width"] (int) – See skimage.util.montage().

• param["split_depth"] (int) – File split depth number.

Returns:

Montage Image

Return type:

Image

set_info(param={})

Copy info from reqs[0] and add params.

static process(reqs, param)

Create montage image from image stack.

Parameters:

• reqs[0] (numpy.ndarray) – Numpy 3D array with the shape of (frame number, height, width).

• param["grid_shape"] (tuple of int) – See skimage.util.montage().

• param["padding_width"] (int) – See skimage.util.montage().

Returns:

Montage image

Return type:

numpy.ndarray

post_run()

Update image size to montage image.

class RGB(info_path=None)

Bases: RGB

Create montage image from RGB image stack.

This class is brief wrapper of skimage.util.montage().

Caution

The input image stack must be split so that all frames to be tiled into a montage image are included.

Parameters:

• reqs[0] (Image) – Image stack to create montage.

• param["grid_shape"] (tuple of int) – See skimage.util.montage().

• param["padding_width"] (int) – See skimage.util.montage().

• param["split_depth"] (int) – File split depth number.

Returns:

Montage Image

Return type:

Image

set_info(param={})

Copy info from reqs[0] and add params.

set_index()

Use Image super class set_index.

static process(reqs, param)

Create montage image from image stack.

Parameters:

• reqs[0] (numpy.ndarray) – Numpy 3D array with the shape of (frames including RGB color frames, height, width).

• param["grid_shape"] (tuple of int) – See skimage.util.montage().

• param["padding_width"] (int) – See skimage.util.montage().

Returns:

Montage image

Return type:

numpy.ndarray

post_run()

Update image size to montage image.